rs3718999 SNP Detail

Summary

• ID
  rs3718999
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:28695701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAACTATCAG CATTGCAGAG TTGATATTGT GATCATCACA
  AATTGTGCTG TTCTCATATA GTAAATACTG CATATTATTT TGTTGCTTTA AAAATTAGCC
  R
  TAGATGATGT GATTAATCTA TGATGATTAG ACAGCTACTA AGTAATAAAA GACACATGGG
  GAAAATGAAG GTGACAAGTA CAGCTCCTAG TGCACTCTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J
ss5095276	WI_WGS_11_28748911	WI	MOUSE	f	SNP			A	G
ss38840107	mCV23802652	ABI	CRAMUS_MOUSE	f	SNP	G	A		G	A
ss131881207	ENSMUSSNP4673637	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J
rs3718999					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:28695701 () rs orientation: forward

Symbol	Name	Function Class
Mir216b	microRNA 216b	490 bp upstream
Mir216c	microRNA 216c	497 bp downstream
Mir217hg	microRNA 217 host gene	within coordinates