rs3719039 SNP Detail

Summary

• ID
  rs3719039
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:28695727 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGTGATCAT CACAAATTGT GCTGTTCTCA TATAGTAAAT
  ACTGCATATT ATTTTGTTGC TTTAAAAATT AGCCGTAGAT GATGTGATTA ATCTATGATG
  W
  TTAGACAGCT ACTAAGTAAT AAAAGACACA TGGGGAAAAT GAAGGTGACA AGTACAGCTC
  CTAGTGCACT CTCCTTGTGC TTTTTAGATA TATCTATAA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J
ss5095316	WI_WGS_11_28748937	WI	MOUSE	f	SNP			T	A
ss38803318	mCV23802651	ABI	CRAMUS_MOUSE	f	SNP	A	T		A	T
ss131881210	ENSMUSSNP5596466	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J
rs3719039					SNP	A	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:28695727 () rs orientation: forward

Symbol	Name	Function Class
Mir216b	microRNA 216b	464 bp upstream
Mir216c	microRNA 216c	471 bp downstream
Mir217hg	microRNA 217 host gene	within coordinates