rs3719054 SNP Detail

Summary

• ID
  rs3719054
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:70340729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTC AGGCCTTGAC TGCATACTTG
  Y
  GACATGGGTA CAGCCACTCC TTCCG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J
ss5095331	WI_WGS_10_70567813	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J
rs3719054					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:70340729 () rs orientation: forward

Symbol	Name	Function Class
Fam13c	family with sequence similarity 13, member C	within coordinates
Gm29783	predicted gene, 29783	within coordinates
Gm66439	predicted gene, 66439	864 bp downstream
Rr216098	regulatory region 216098	1672 bp proximal
Rr228592	regulatory region 228592	473 bp proximal