rs37191492 SNP Detail

Summary

• ID
  rs37191492
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:3402817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTTTATT TCTTTTGACT
  CTTTTTGGTA CAAGGACTCA TGAGTATTGC TTCTCAACAA CAACAACAAC AACAACAACA
  ACAACAACAA CAAAAGAAAT TTCAAAGCTC TCCCTACGGA GAAGCAAGGT TTTCGAAAAT
  CATCAGTGCG TTTAGCCTTC AATATTTCAT GGCAAGTCTT TTTGAGTGCC TTTGGTAATG
  M
  GTGGGCAGGT ATATTAGCCC TTCCTATCAA CTCTGAATTG GCTGGTTATC CTTGCTTCAG
  ATGCACAAAC TGGAGTGCTG CCTCACAAAC ATAATGAATC AAATAAAGGG GTTGTAACCA
  TTCAAGTTTG TCATCTTAAA TTTGCTGAGT TGATATGGGC AAAAGGAGAT AGAAATGGCT
  TATTTCAACT TTCCTGTTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss50638827	NES14033325	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	A	C	C	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs37191492					SNP	C	C	C	C	C	A	C	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50638827	NES14033325	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:3402817 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21331	CpG island 21331	1056 bp proximal
Cwf19l2	CWF19 like cell cycle control factor 2	775 bp upstream
Rr401237	regulatory region 401237	550 bp upstream
Rr673633	regulatory region 673633	279 bp proximal
Rr673634	regulatory region 673634	285 bp proximal
Rr673635	regulatory region 673635	483 bp proximal
Rr673636	regulatory region 673636	718 bp proximal
Rr673637	regulatory region 673637	786 bp proximal
Tssr83616	transcription start site region 83616	1222 bp upstream
Tssr83617	transcription start site region 83617	1241 bp upstream