rs37194496 SNP Detail

Summary

• ID
  rs37194496
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149754555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTACTCCCA ATGTGCAGGT
  AGACAGCTAA AGCTTAGGAG CTAGATTGGG GGACATTGTG AAGACATTGG GTGACATTTC
  CAATGGGAAA GATGTATGTA AGTTGCTTGT GAGCTCTACC ACTATGTCTA AGGCAAAGAT
  GCAGATACAA GGATAGGTTC AGTTTCAATT CAAGCAACAT CTAACCAATA AGCAGAAAGA
  W
  ATTTGATAAA GCATTATCAG CTAAGGGCTT AGGTGACTGT TGCATTGATA CCAAGTAGGG
  AATTTTGAAT ATTGCTTTAT CTTAACAGTA GTCAAAATAT TATTGGTATG TGGGCATTTT
  AAATGCTTGT TTTACTTTAT GTATTTAAAA GCCTGTGAGA GTGGACAAAA CTCCTTGCAT
  CCTATGATTG AAAGAAGGCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51056672	NES13434279	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37194496					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51056672	NES13434279	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149754555 () rs orientation: forward

Symbol	Name	Function Class
Rr587358	regulatory region 587358	1650 bp proximal
Tssr32377	transcription start site region 32377	807 bp upstream