rs37196146 SNP Detail

Summary

• ID
  rs37196146
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83486137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCATAAGA ATTAATCAGG
  CTGGGTATGA TAATAATAAT AATCACTGCA CCCTTGGAGG TAGAAGCAGG GCAATTAAGA
  GTTCAGGGTA TTTTCAACTA CAAAAGGAAT TTGAAGTCAA GCCTGGGCTA CACAAGACCT
  GGTCTGATTT TTTTTTTTTC AGAATCTCTT TGGTTCTATT CTAAATTCCT AAGAGAAAGA
  R
  CCTGCAGCAT GAAGCTAGGG TTTTATAGAA CAAACAAGAG CTGGGTTAGT TACTTTTCTT
  GTTGCTGTAG CATGATACCT GACACAAGCA AGGTATGAGA GGAAAGGTTT GTTGGCTCTT
  GGATTCAAAG GATTTCAGTC CAGGACAACG GATTAAGGCC CACCTTAGAG ACAGACCTAC
  CCTCCAGACA TGCCTCATCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51354481	NES13746086	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37196146					SNP	G	G	G	G	G	G	A	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51354481	NES13746086	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83486137 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17605	CpG island 17605	1769 bp distal
Rr399724	regulatory region 399724	1977 bp downstream
Rr632885	regulatory region 632885	1696 bp distal
Rr632886	regulatory region 632886	381 bp proximal
Rr632887	regulatory region 632887	1248 bp proximal