rs37196956 SNP Detail

Summary

• ID
  rs37196956
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83018932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAGTGGC TTACTGGAGA
  GGAGACTCTT CCAACTCAAG CAAAGGTATT TATTTGTTGA CTAAAGGATG TATTCAGTAG
  TGGTTCCAAC TAGGTTAGAG GTGGAATTAA TTCATATTAA TCCACAAATC TATCAACCCT
  GTTGGGGCAC TGGGGAGGAA GAAGTGAATA AAATAGCCGG GACCTGAAAT GGAAAAGAAT
  R
  GTGTTGTAGG AAGCAGCCGG GGACCACAGA TGTAAAGATT GGTTGCTAAG AGATGGGCAA
  AGCAGGAGTT GCCCTAGTGA GATGGGATCT GAATGAAAAT GAAGCATCTC CAGGAGTCAG
  TCCCCTCTCA TCTCATCCTT TAGCTCACAA GCATTGTTGT TTAGCCTTCT ACCTCCAGAT
  TAGGCTGCGA CTCCCTCAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50989446	NES13924180	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37196956					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50989446	NES13924180	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83018932 () rs orientation: forward

Symbol	Name	Function Class
Rr578836	regulatory region 578836	1008 bp distal
Rr578837	regulatory region 578837	1244 bp distal
Rr578838	regulatory region 578838	1238 bp proximal