rs3719767 SNP Detail

Summary

• ID
  rs3719767
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:115285935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAC CAAAGTGTCT GGTTTCTCGC
  R
  CACTCCCTCC ACCCTGCTGA GGATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5096050	WI_WGS_5_113114125	WI	MOUSE	f	SNP		G	A
ss45865987	mCV23012852	ABI	CRAMUS_MOUSE	f	SNP	G		A	G
ss149121423	ENSMUSSNP4455325	ENSEMBL	ENSEMBL_Sanger	f	SNP				G
ss321654348	CHEV_5_115597885	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3719767					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:115285935 () rs orientation: forward

Symbol	Name	Function Class
Mlec	malectin	within coordinates
Rr618145	regulatory region 618145	1963 bp distal
Rr618146	regulatory region 618146	158 bp distal
Rr618147	regulatory region 618147	1314 bp proximal
Tssr48205	transcription start site region 48205	153 bp downstream
Tssr52756	transcription start site region 52756	within coordinates
Tssr52757	transcription start site region 52757	130 bp downstream
Tssr52758	transcription start site region 52758	179 bp downstream