rs37197775 SNP Detail

Summary

• ID
  rs37197775
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8061638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATTCAAGT TTTTCCTCCC
  AGATTTCAAG GGATTCAACA CTATTGACAA TATTTATATT CCAGCCATGG GCAACTTTAC
  CTATGACTTT TCTTTTAAAT CAAGTGTCAT CACACTGAAT ACCAATGCTG GACTTTATAA
  CCAATCAGAT ATCGTTGCCC ATTTCCTTTC TTCCTCTTCA TTTGTCACTG ACGCCCTGCA
  R
  TACAAATTAG AGGGAACATC ACGTCTGATG CGAAAAAGGG GATTGAAACT AGCCACAGCT
  GTCTCTCTAA CTAACAAATT TGTAAAGGGC AGTCATGACA GCACCATTAG TTTAACCAAG
  AAAAACATGG AAGCATCAGT GAGAACAACT GCCAACCTCC ATGCTCCCAT ATTCTCAATG
  AACTTCAAGC AGGAACTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50958137	NES14429026	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37197775					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50958137	NES14429026	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8061638 () rs orientation: forward

Symbol	Name	Function Class
Apob	apolipoprotein B	within coordinates
Tssr112661	transcription start site region 112661	1818 bp downstream
Tssr112662	transcription start site region 112662	1577 bp downstream
Tssr112663	transcription start site region 112663	1336 bp downstream
Tssr112664	transcription start site region 112664	1312 bp downstream
Tssr112665	transcription start site region 112665	1157 bp downstream
Tssr112666	transcription start site region 112666	1137 bp downstream
Tssr112667	transcription start site region 112667	1088 bp downstream
Tssr112668	transcription start site region 112668	952 bp downstream
Tssr112669	transcription start site region 112669	865 bp downstream
Tssr112670	transcription start site region 112670	809 bp downstream
Tssr112671	transcription start site region 112671	706 bp downstream
Tssr112672	transcription start site region 112672	124 bp downstream
Tssr112673	transcription start site region 112673	56 bp downstream
Tssr112674	transcription start site region 112674	8 bp upstream
Tssr112675	transcription start site region 112675	35 bp upstream
Tssr112676	transcription start site region 112676	138 bp upstream
Tssr112677	transcription start site region 112677	288 bp upstream
Tssr112678	transcription start site region 112678	412 bp upstream
Tssr112679	transcription start site region 112679	437 bp upstream
Tssr112680	transcription start site region 112680	456 bp upstream
Tssr112681	transcription start site region 112681	503 bp upstream
Tssr112682	transcription start site region 112682	516 bp upstream
Tssr112683	transcription start site region 112683	553 bp upstream
Tssr112684	transcription start site region 112684	597 bp upstream
Tssr112685	transcription start site region 112685	645 bp upstream
Tssr112686	transcription start site region 112686	693 bp upstream
Tssr112687	transcription start site region 112687	773 bp upstream
Tssr112688	transcription start site region 112688	874 bp upstream
Tssr112689	transcription start site region 112689	916 bp upstream
Tssr112690	transcription start site region 112690	941 bp upstream
Tssr112691	transcription start site region 112691	992 bp upstream
Tssr112692	transcription start site region 112692	1028 bp upstream
Tssr112693	transcription start site region 112693	1047 bp upstream
Tssr112694	transcription start site region 112694	1185 bp upstream
Tssr112695	transcription start site region 112695	1404 bp upstream