rs37198885 SNP Detail

Summary

• ID
  rs37198885
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:26758715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCAAAGG CTTGCTCCTT
  CACTCAGAGG CAAATTCCTA CTTCAGATTG TCAGTAAAAT TTCAGGAGGC AGCTTTGGGT
  TTGGTTTTGA ATTAGGCCAA CCCTGGAGCA ATTTATTTCA AATCTGCTAG GAATGAAACC
  GCTGTGTAGG AGTGTGCAGA CTGTAGCTAA GAGTGGTCTA GGATAAAGTT GGGCTGACCA
  Y
  GTTTTTGGCA CAGTGAGTCT CCAACACAGA AAGGGGAGGA ATATCCTTTT CTCACATGTG
  AAGTGCATGC TTCAATGACA AGCCCATGAG AATGAGCTCT GTAAGGGAAC CTGAAAGATC
  CATTGGTTCA AGTAGACTTA TACCTCTTAA GACCAATTAG AGGAAGGACA TTCCATTGTG
  GTTGCTAGTG AGCAAGGTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss50831480	NES14195948	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37198885					SNP	C	C	C	C	C	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50831480	NES14195948	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:26758715 () rs orientation: forward

Symbol	Name	Function Class
Arhgap18	Rho GTPase activating protein 18	within coordinates
Tssr92804	transcription start site region 92804	1985 bp downstream
Tssr92805	transcription start site region 92805	1506 bp downstream