rs37207870 SNP Detail

Summary

• ID
  rs37207870
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:32572266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCA AACTAGGAGT CGCAGTCATC
  Y
  CTGCCATAAA GGGAAGGCTC TAGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss51692642	NES14756041	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	C	C	T	C		C	C		T
ss148200735	ENSMUSSNP1310991	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss321505223	CHEV_5_32717295	CHEVERUD	SCREENING_POP	f	SNP												T			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs37207870					SNP	T	T	T	T	T	T	T	C	C	T	C	T	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51692642	NES14756041	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:32572266 () rs orientation: forward

Symbol	Name	Function Class
Rr609355	regulatory region 609355	1390 bp distal
Rr609356	regulatory region 609356	1000 bp distal
Rr609357	regulatory region 609357	within coordinates
Rr609358	regulatory region 609358	1710 bp proximal