rs37211016 SNP Detail

Summary

• ID
  rs37211016
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:71227021 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTGTAAGT CATACTGAAG
  ATGTTAAATC CTGTACACAG GAAGTAGTAG TCAAAGGACA AGTCTTAAGA AGATCCTAAG
  CATTGAGTCC ACGGTGATGC CAAGGACAAA TGGGAATGAG TCAGCACTGG AAGCAGAAAG
  TCCAACTAGG AGATCACTGT GATAATTCAG AAAGGAGACA ATAACATGTA GAAGCAAGAG
  Y
  ATTTCCATGG AGAGAGGAAA ATAAAGACAT ATATAGACCT AGAATGCAAA CTCCCCTGTG
  TGTCAACTCT GTTCCCTGCT CATGTGGAAT TAGGTTGTGG TAGATTCAGG ATTCGCAGAA
  AAGGTACTGG GAGTTAGTGT TCATCTCTCC GCACGGGCTG AGTGGGGGCA TGACTGGGCA
  AGTGCTTTGA AGTCCTTTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ
ss50470060	NES13703506	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ
rs37211016					SNP	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50470060	NES13703506	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:71227021 () rs orientation: forward

Symbol	Name	Function Class
Rr393876	regulatory region 393876	within coordinates