rs37211949 SNP Detail

Summary

• ID
  rs37211949
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:35357556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTAAAAA CGCTAAGTGA
  CCTTCCAGGC AGGCTGTGAA GTTTCCCAGC AATTAGGAAG ACACATCACT CACTCAGATG
  GTAAAGTGGC TGCTACTTAG AACACATAGG AAAAGTGCTC TCAGAGAATG TTGTGCCGAT
  GGCCTTGCAT ATTCTGGATG TTGTAAACTC TAGCCTTCTG CCTCTATCTG TTTCTTCACT
  K
  TCACCCAGGA AGGTCTGAGA AGGAACTCAC TGAGTCCTCA GCTACCTCTG GATGGAGACC
  TGCTACAATC CCAGGTGGCT CTGTTGTAGG CAGCTGTCAC ACACAGATGT CTTGTCCCAG
  GAGTCTGGGA ATGCCATGGA TGGGAGGTGG CTCTATTCAG ACCAAAGGAG AGCATTGCAG
  GCTTTATTGT TAGCACCAGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51091093	NES14361645	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	G	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37211949					SNP	T	T	T	T	T	T	T	T	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51091093	NES14361645	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:35357556 () rs orientation: forward

Symbol	Name	Function Class
Rr275746	regulatory region 275746	1356 bp distal
Rr275747	regulatory region 275747	356 bp distal