rs37218268 SNP Detail

Summary

• ID
  rs37218268
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:56925182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAACACAA GTTGTACTAG
  TAACTGCTTT GTATATATTA CAAACTTTTA GAAACCAGGA GCTTAGTTTG TCAGATTGTA
  ACTATCCAGG ATGGATGGAT GGATGGATAG AAAACTGGTA GCTAAGGAAA CAGAAATCTA
  TCTTTTTAAA AATACATTTT AAATGGAATT AAATAGGAGA AAAGTTTATT TCTTTTACTT
  Y
  ATCAATTCTG TTATTAAGAA AAATTATTTA TAGTTCTTTA AACACTCATG AATAAATACA
  TCCAAGCCAA AAGTAAGCAA CTACCAGCCT AGCTAAAATG AGCCTCAAGA GATCCAAGGA
  AGGAATTAGC TAATGAGGGC CAAGCACCCA GAACACTCTC ACACACCATT CTTCTGCTTC
  ATGTCACTAT CATATGCTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51252410	NES14269375	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37218268					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51252410	NES14269375	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:56925182 () rs orientation: forward

Symbol	Name	Function Class
Gm51624	predicted gene, 51624	within coordinates
Satb2	special AT-rich sequence binding protein 2	within coordinates