rs37219965 SNP Detail

Summary

• ID
  rs37219965
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90885281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAACTTGAA GGGAGAAAGC
  ACTGGTGTGG TCCTGTCCAA GCAAAGCCAA TGGGAGCAGG AGTCACAGCC CAGGCACAGA
  CAAGCTCCTG GCCAGCCTGG GGACACGTTC ACTTTTATCC ATTTGAGCTT CACAGTGGGC
  ACGGTGAAGC CATCTTCCTT GGTGAGATAA CAATGTTCCA CTCTGTGATG TTCTCTAGGG
  Y
  TTGTTTGACT CTGTTGGTTT TGTTGTTTGC TTGTTTGTTT GTTTGTTTGT TTTCTCACTG
  TGCAGCCCAG AATAAGCTCG CCATTCTCCT GCATCAGCTT CACAAGTGTC GGGATTCGAG
  GCCTACATCA CCACACCCAA CAACAATGTC TCATTGTTCA GACTCAACAG CTAATCACAC
  TCCCAGAAGC AAGGATTAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ
ss51301130	NES14511544	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ
rs37219965					SNP	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51301130	NES14511544	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90885281 () rs orientation: forward

Symbol	Name	Function Class
Rab17	RAB17, member RAS oncogene family	574 bp downstream
Rr415504	regulatory region 415504	410 bp distal
Rr415505	regulatory region 415505	656 bp distal
Rr415506	regulatory region 415506	509 bp distal