rs37220210 SNP Detail

Summary

• ID
  rs37220210
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62900022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGCGTAGG CCTAAGCTTT
  TCATGGCCAC TATACCTCAA GATCTCCATG TCAAGGCCCA GGTCAGAAAC TTGTGTCTTC
  TAGCCTCAAG ATCTGGATCA CAGGTGAGCC CTCCAATTCT GCACTGTAGT TTGTTCCAGA
  TGTAGTCAAG GTGATGACCA GGAATAGCCA CCACACTGTC CATGCTCATG GATGGTTAGA
  Y
  TAATTCTGTG AAGTCACTAT ATTCTGGAAA TCCACATACA GATTCAACAC AATCCCCACC
  AAACCTCCAA CAACATTTTT TCATAACTAG TGAAACAATC CTAAAGTTCA CATGGAAGCA
  CAAAGAAACC TAAAGAGCTA AAATCCTTCC CTAATCTTCC CCTTAACCCT AAGCCAAAAG
  AGCAAGGGCT GGCTTCACCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52026512	NES15043484	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37220210					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52026512	NES15043484	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62900022 () rs orientation: forward

Symbol	Name	Function Class
D9Mit317	DNA Segment, Chr 9, Massachusetts Institute of Technology-317	1544 bp proximal
Gm35574	predicted gene, 35574	within coordinates
Rr680908	regulatory region 680908	1618 bp distal