rs37230755 SNP Detail

Summary

• ID
  rs37230755
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:75713974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCGACGT CATCGCCGCG
  CGACTGGTCC CCGCAGGCGG GGAGGAGAGA ACGCCGAACT TCACTATGCG TGGACACGGG
  GTTGGAAGGC ACCGTCGCCC CGGCAACCCT GGAAGGACGC ATGCGCAGAA CGAGAAAAAT
  CCGTCATCTT GAAGCGCCCG GAAGTGGCCC GCAATCTGGC TTCTGCACCA ATTCCTGCGC
  R
  TCATTTCCAC CGCTGGGGGT TCCTCGGAAG ACTTGGAGGA GATAGGTTGC TAACAGTTTC
  CCCTAGACCC AGGAATTCCT TTTATCAATT TATTTGTTTG AGACAGGATG TATTTCTGGC
  TGGAGAGAAA CATAACTGGG GAACTCGCTA TGTAGACTAG GCTGGCCTCG AACTTACGGA
  AGTTCTCTTT CCTCTGCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51719859	NES14560196	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37230755					SNP	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51719859	NES14560196	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:75713974 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7192	CpG island 7192	within coordinates
Gm34851	predicted gene, 34851	1380 bp upstream
Gm62305	predicted gene, 62305	within coordinates
Rr390927	regulatory region 390927	1351 bp upstream
Rr404450	regulatory region 404450	within coordinates
Rr504550	regulatory region 504550	221 bp distal
Rr504551	regulatory region 504551	17 bp distal
Rr504552	regulatory region 504552	within coordinates
Tssr131679	transcription start site region 131679	within coordinates
Tssr134873	transcription start site region 134873	193 bp upstream
Tssr134874	transcription start site region 134874	171 bp upstream
Zc3h3	zinc finger CCCH type containing 3	210 bp upstream