rs37236344 SNP Detail

Summary

• ID
  rs37236344
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:25277857 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGATCTGG AAAGGCAGTA TTGTGAGTAG ACTGGCAGCA
  GTGTTGGCTA GATACCTCCA AAGAGGTACA CAGTGTTCCC ACCTTCGGCT CACTCCTACA
  R
  TTTGGCAGCT CTGTAATCTG AGTTTGCACC CAACTCTGGC TCTTTGTGGC TCCTCTTCCG
  TCCCCTAATA AACACCCTTT CAGCAGATGT CCCCAGCGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss50736055	NES13577674	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A	G	A	A	A	G	A		G	G		G
ss146282444	ENSMUSSNP355331	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss325779925	CHEV_19_25374983	CHEVERUD	SCREENING_POP	f	SNP											A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs37236344					SNP	G	A	G	A	G	A	A	A	G	A	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50736055	NES13577674	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:25277857 () rs orientation: forward

Symbol	Name	Function Class
Kank1	KN motif and ankyrin repeat domains 1	within coordinates
Rr364353	regulatory region 364353	within coordinates
Tssr155675	transcription start site region 155675	77 bp upstream
Tssr155676	transcription start site region 155676	93 bp upstream