rs37245254 SNP Detail

Summary

• ID
  rs37245254
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:96862058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCTTCAAAT CTATTGTTCA TCTTTTGTCA CTGTCTTGTT
  AGCCTATTTG ATTTTCAGAG GGAGTCTCTG TATGGGCCTG AGTAGTTGGT ATTATAGGCA
  Y
  GTGCCACTAC TCCTTTCCTG AGCCTTTTTT CCCTAGTATC ATTTGTTGAA AAGTCTGTCT
  GTCTTCCATT TAATTTCTTT TGTACCTTTA TCAAAAATT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51918193	NES14942252	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	T	T	C	C	T	C	C	T	T
ss145435531	ENSMUSSNP319783	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37245254					SNP	C	C	C	C	C	T	T	C	C	T	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51918193	NES14942252	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:96862058 () rs orientation: forward

Symbol	Name	Function Class
Gab2	growth factor receptor bound protein 2-associated protein 2	within coordinates
Tssr67958	transcription start site region 67958	1405 bp downstream
Tssr67959	transcription start site region 67959	1338 bp downstream
Tssr73571	transcription start site region 73571	1675 bp upstream
Tssr73572	transcription start site region 73572	1570 bp upstream