rs37245617 SNP Detail

Summary

• ID
  rs37245617
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:89822747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATCACACT CCTCCTCAGC
  TTCTCCCAGC TTTTTCCTTT AATGCTATCA AGTGTATTTC TGTTAACTAT GAACTTTGAG
  ATTTACGTGT ATTTTATGTA TCAATATATT AAAATGAAAT ACTCCTTTCT GGAGTGGGGA
  AAGCAGTTTT CTAACACTTG TGAAACTCAG AAATCTCTGA AAACTACCAG ATTCACAATG
  M
  CTTTCCCCAA GGTTAAAGAA ACAGTAAGCA ATTCCAAGGA AAGTGAATAA TCTCTTCAGT
  GAACTTCTAC TTGTACACGG AACTCTATTG ATACACTTTT TGATTTTTTC ACTCATGCTG
  AAGAGACCTT TTATATGATT TAGCTTTGAG TCTACACATT CCTAATAGTA CTCTCTTATC
  ATGTTCTTAT ATATAATCTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50572536	NES13656585	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37245617					SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50572536	NES13656585	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:89822747 () rs orientation: forward

Symbol	Name	Function Class
Gm41800	predicted gene, 41800	within coordinates
Rr352504	regulatory region 352504	991 bp distal