rs3724773 SNP Detail

Summary

• ID
  rs3724773
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  107
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:45043546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        cctttaatcc cagcacttgg gaggcagagg caggcagatt
  tctgagttag aggccagcct ggtctacaaa gtgagttcca gagaaaccct gtctcaaaaa
  M
  ccaaaaaaaa AAAAAAAAAG AAAAAAAAAA AGCAATAGCT GTCCAGGCTA GGGCTCCTCA
  TGTTATCAAG AGGACCAGGA AACTATTTCT CAAAGACAAA                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss5101079	WI_WGS_13_44487609	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs3724773					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:45043546 () rs orientation: forward

Symbol	Name	Function Class
Jarid2	jumonji and AT-rich interaction domain containing 2	within coordinates
Rr276124	regulatory region 276124	655 bp proximal