rs37253713 SNP Detail

Summary

• ID
  rs37253713
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54568462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAAACCT TGCAGATTCC
  TTGTCCTTGA CCTACCCTGT AGACAGCCCA GCTGTTTAGC ACACTGCTCT CTCTGAGCCC
  TATCTTCCAC TCTTCTGTTC TTGCTCTCTT ATGGGACACA AATGCAGTTC CTCCATATCA
  GAGATAACCT CAATCTCTGT TCAGGTACGG ACAGAGAGGG CCAGAGACTT TCCAAGGTCA
  W
  AGCAGGCTGG AATGGAAACC ATGGGTGCTC CCTCGAACTT TTCGGTCATT GCCTGCCCGC
  TCCTACCATA TACCAGGTCA CCTCCAACCA TGGGGAGACA AAGGAACGTG CTTGCTGACT
  GAAAAAAAAG TCTTTCTTAA TACCAATGTG ACTTGTACCT CAGTTGAATC TCTAACGGCC
  AACAGAGGAA CAGACACACT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss52018248	NES15041874	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37253713					SNP	T	T	T	T	T	T	T	T	T	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52018248	NES15041874	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54568462 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	within coordinates
Rr206444	regulatory region 206444	138 bp proximal
Tssr89653	transcription start site region 89653	488 bp downstream
Tssr89654	transcription start site region 89654	666 bp downstream
Tssr89655	transcription start site region 89655	706 bp downstream