rs37256549 SNP Detail

Summary

• ID
  rs37256549
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:45163096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAATATTA GCCTCTACTT
  TAAATGAAAG CTCAGAGTGT CATAGAACAC AGCTTAAATA AAGAACAAAG TGAATTTCTA
  AACTGGACCT TCACTACATT GGGATAATGT CACCAGCTTG CCACATTGAT ATATTTAAGG
  CTTACTTCAG GTCTGAATGG AGGGAATACA GACAAGTTTC CACTGGCAAT GAACTTCACA
  Y
  AAAAGGCAGG GTTATCTTCC ATATATTTAA TTTCCATATC ATCCTTTAAA AGTTAAATTT
  GTGGATTTTT AAAATGTGAA AATAAACAAA TAAATGAATA TGTCCCATAG TGAGAAAAAA
  CATTTGGGAG ACAAGAATAT AGTTGTATAA TACAAAACAA TAAAGAAAAT AAGCAGAAGT
  TATTTGCTTT TCTGAACAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51953167	NES14875929	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37256549					SNP	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51953167	NES14875929	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:45163096 () rs orientation: forward

Symbol	Name	Function Class
Rr382009	regulatory region 382009	1337 bp upstream
Rr662787	regulatory region 662787	181 bp distal