rs3726106 SNP Detail

Summary

• ID
  rs3726106
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27835276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCATCTG GAGCTGATAT
  AGATGTCCTC ACCACCAAGA AGAAACAGGG TAGTGGAAAA CCAGATCCCT CAGTCCAGAG
  GACCTTTAGG TAAGACTTAC CTTTAGGTAA GGTAATGTCC AGGACGTTAG GTAAGAATCA
  GGGTTTCTCC ACACATAAGC AGATCAGATC TCAAATTCAA ATAAATCAAG ACCCCAAAGC
  Y
  ACTGCAGGAC CCAAAACCCC TATATGATGA GGGATTTTAA AGATAGCAAC AAGCATTTAG
  TTTTGTTCCT CAGAGGCGAG AATCTTCCAA AGTTGCTCCT GGTATCCCAG GGGACCCAAA
  TGTAGGACTA GGGAGATGGA GGATGAACTG GGGTTACTAG CAAGCTGGTG TTACCATTTG
  AGGACTAACC TGTTCATTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss5102420	WI_WGS_7_20392069	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs3726106					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27835276 () rs orientation: forward

Symbol	Name	Function Class
Fcgbpl1	Fc fragment of IgG binding protein like 1	within coordinates
Gm21925	predicted gene, 21925	within coordinates
Gm38976	predicted gene, 38976	within coordinates
Rr644170	regulatory region 644170	1880 bp proximal
Rr644171	regulatory region 644171	1961 bp proximal
Tssr65385	transcription start site region 65385	793 bp downstream
Tssr65386	transcription start site region 65386	1253 bp upstream
Tssr65387	transcription start site region 65387	1582 bp upstream
Tssr65388	transcription start site region 65388	1679 bp upstream
Tssr65389	transcription start site region 65389	1735 bp upstream
Tssr71448	transcription start site region 71448	1247 bp downstream
Tssr71449	transcription start site region 71449	1257 bp downstream
Tssr71450	transcription start site region 71450	1274 bp downstream
Tssr71451	transcription start site region 71451	1667 bp downstream