rs37264717 SNP Detail

Summary

• ID
  rs37264717
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10612008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTAGAGTC CAGGACCTCT
  GCTGCCAGTC ATGTGGGCTA GACTGTTGCT CCATGTCGCC TACATCTTGA TCCCGTTGCT
  GGGGTCTTCA GCCCGAGGCT ATACCGGGAG GAAGGCGCCA GGGCACTACT CTGCGGAGAG
  GTAAGAGCCC GGTGCCTTTC AGCGGCCCAG CCTTCTAGCG CCACTGCGTG GAGCTGGAAG
  R
  CACTAGCATA GGGCAGCTGC TGGACCTGTA GCCTCTGTGG CGAGGGCACA CCAGGGGTCT
  GGACAAAGAG ACAGTAGTTT GTGCCAGTTG GGTGGCCCTG GCTGGGGACT GCTCTGGCTA
  AGGAATCTGG GAGATGGAGA TCGCGGCTCC AAGGAATCTT GTACTATGGG AATAGGCTGA
  CCCTCTGGCT AGGGAACCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50601056	NES13642633	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37264717					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50601056	NES13642633	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10612008 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10616	CpG island 10616	within coordinates
Cpgi10617	CpG island 10617	333 bp proximal
Rr362969	regulatory region 362969	within coordinates
Tssr155079	transcription start site region 155079	399 bp downstream
Tssr155080	transcription start site region 155080	332 bp downstream
Tssr155081	transcription start site region 155081	320 bp downstream
Vwce	von Willebrand factor C and EGF domains	within coordinates