rs37266112 SNP Detail

Summary

• ID
  rs37266112
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105290824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGTTGATG TAGTGCCTTC
  TTATGTGTAG AAGGACAAAT TCAGCATTCC CAGCACCCCA GCAAAAGCAG GGATTATGGG
  TAGAGCTTTA AGGTTAGTAA TAGCAATGGG AAATTGGTTC CAAAAGGAGA GCTCTCAGTG
  GCTGTCCTTG GGACTAACTC AAGGACCTGA ATATACATTG ACTCATAACT AGTTTTTATT
  Y
  TCAGCTGTCA AAAAGAATTG CTGTGAACCT AGGGGAAGAA GGTAAAACCA AACAACAAAA
  GCAGGAAGAA AACTCTACCC CCTTAGGCTT TAGCCACTGC TTCCTAGGAG GTCAGTGACA
  ACAGAACAAA GACAAGCCTC TAAGAATTCA GGAATGTTGA CCATTTCCCC AATTTACTCT
  CTTAGTACTT CCTGCCTTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss51920948	NES14946575	PERLEGEN	MM_PANEL2	f	SNP	T		T	C	T	T
ss322370123	CHEV_7_112790131	CHEVERUD	SCREENING_POP	f	SNP		T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs37266112					SNP	T	T	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51920948	NES14946575	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105290824 () rs orientation: forward

Symbol	Name	Function Class
Arfip2	ARF interacting protein 2	1201 bp upstream
Cpgi19541	CpG island 19541	396 bp distal
Gm22504	predicted gene, 22504	721 bp downstream
Gm45799	predicted gene 45799	within coordinates
Rr400513	regulatory region 400513	1069 bp downstream
Rr652793	regulatory region 652793	1551 bp distal
Rr652794	regulatory region 652794	1312 bp distal
Rr652795	regulatory region 652795	1017 bp distal
Timm10b	translocase of inner mitochondrial membrane 10B	within coordinates
Tssr2358	transcription start site region 2358	1196 bp downstream
Tssr68382	transcription start site region 68382	1103 bp downstream
Tssr68383	transcription start site region 68383	1031 bp downstream
Tssr68384	transcription start site region 68384	808 bp downstream
Tssr68385	transcription start site region 68385	590 bp downstream
Tssr68386	transcription start site region 68386	547 bp downstream
Tssr68387	transcription start site region 68387	720 bp upstream
Tssr68388	transcription start site region 68388	998 bp upstream
Tssr74083	transcription start site region 74083	1247 bp upstream