rs37270170 SNP Detail

Summary

• ID
  rs37270170
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:4432316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTCATCA AGGAAATTTT
  CCAATAGATG AAAACCACTA CAGAAAACTA CAACCAATCA AAGTGCAGAG TTATGGAGGC
  CAGACCCAAT TGATGAGTCA TTCTTTGATA AACAATTCTA AGGTGCTATT TGCTCATGAG
  AGTGAAAAGA CCTAGACCTT TTCGTATGAC TTATTTATTC TTTATTATGA CCATAAAGGT
  R
  GAATTATGAC TCATATGGCT GTATGTGTAT TCAATGTGGC TACTTGGCAG AACATGCTAT
  AACAAAATCA CTGTCTCTGC ACTTTTTCAC AGCTACTTCC TCACAGTGGA ATTTGAACAT
  GTCACACGTG AAGTCCCATA TAGTATCCCC CAACCCTTCT TAAGATTAAT GTGTTTGAAA
  GAAGCCTCTC CTGCTTGGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51224825	NES14300772	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37270170					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51224825	NES14300772	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:4432316 () rs orientation: forward

Symbol	Name	Function Class
Gm37483	predicted gene, 37483	1253 bp downstream
Rp1	retinitis pigmentosa 1 (human)	within coordinates
Tssr10872	transcription start site region 10872	1847 bp upstream
Tssr10873	transcription start site region 10873	1781 bp upstream