rs37273865 SNP Detail

Summary

• ID
  rs37273865
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143507380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATACATAT AAGGTGTATA
  CATCCTTCCT CTTGAAGGTC TCCTGGCAGT TTTCCTTGCT GAACATCCAT GTAATTGTAG
  ACCCAAGAAG AGAGGCGTTT TATGGACAGA AAGGTTTAAG ATTTTAAATC CTGAATTCCA
  GACAAAATTA ATTACTAACT TTGAATTTCA TTCATGATTT CCAACATGGT CCAATTCAGA
  S
  AGAACTTGTC ACCTACCCCT ACATTGATAG CTCTGAACAT TGGCAGGGCC AGTCTCTCTT
  ACTCTGCCAT GACAATCAGT GTGACGGTGT CTCTGAACGT GTATACTCAC TTCTCATTAA
  ATGTTGAGTG TCCACAACAC GCTAAGTGTT ATTTAAACTT ATACTTTTTA AATTACTTAT
  TAATGAGTGT AGAAATACAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51660266	NES14644462	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	G		G	C	G
ss136026397	ENSMUSSNP3652978	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37273865					SNP	C	C	C	C	C	C	C	C	C	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51660266	NES14644462	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143507380 () rs orientation: forward

Symbol	Name	Function Class
D3Mit198	DNA segment, Chr 3, Massachusetts Institute of Technology 198	1978 bp distal
Gm42705	predicted gene 42705	within coordinates