rs37277542 SNP Detail

Summary

• ID
  rs37277542
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:33891744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGGAAACG GAGAAAAGAA
  ATTAGGGGAG GGGCTACACA CTCTCAAGGC CCACTCCAGT AACCGACTTC CTCCAGCAGG
  GCTCCACCCC TTAAAGGTTC TATAACCTCT GCCAATAGCA CTACTAACTT GGAACCATGT
  ATTCAAATAC ATGAGCCTGT GTGAGACATT GCTCATTCAA ACCACCACAG AGAGTGGGTG
  R
  CCAACCTCAT CCTTATTCTG ATACTTAAGT AATACTTATT TTATCCCCAT CCTATTGTGA
  TAGACAACTA TAATTGAGAC CCTGACAGGA TCTGGCATGA TGGAAAATGA TACTCTCTCT
  AGCACTTTCA GCCATGAAAA CACAGCAGTA AGAACCAAAC TAAAAATGAA AGCCATGTGA
  AATATATTAA TGGATTATGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51593346	NES14854162	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37277542					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51593346	NES14854162	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33891744 () rs orientation: forward

Symbol	Name	Function Class
Exoc4	exocyst complex component 4	Intron
Rr628223	regulatory region 628223	1430 bp distal
Rr628224	regulatory region 628224	941 bp distal