rs37294601 SNP Detail

Summary

• ID
  rs37294601
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60197652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACCTCCAG AGCCTGTCCC
  ACCATAGCCT GGACAAGAAC TGCAGCATAT AAGGAGATAG GCTCTGTGAG TGAGCAGGCT
  CTGCTCATAG AGGGCAGAAT TGCCACTGGC AGACCAGAGG GTCAGACAGG GAGGTCCTGG
  CCAAACCACC AAGGCAGCTT GTGAGCACCT GGCTAACTGC ACCACACGTT GCTTAGTAAC
  R
  ATGGGAAGAG AGACGAGAGC GTTTGCAGCC AGTTCTCAGA TTGCCCACAG TAAAGTCCTA
  GGATGCAGTT TAGCCACTCT GAACAGTGTG AATTACAGAC TGTTCTTACT TTCAATATCC
  CACGTTCAAG CGCAGCCACA TTAAAACCTG CAGGGAATCT GCTTTACTGT GGATTGCAAC
  TTCCTTTGCA ACCCACCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J
ss50866516	NES14170950	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A		A	G
ss323325152	CHEV_10_59824621	CHEVERUD	SCREENING_POP	f	SNP							G			A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J
rs37294601					SNP	A	A	A	G	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50866516	NES14170950	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60197652 () rs orientation: forward

Symbol	Name	Function Class
Cdh23	cadherin related 23 (otocadherin)	within coordinates
Rr228092	regulatory region 228092	within coordinates
Vsir	V-set immunoregulatory receptor	within coordinates