rs37295283 SNP Detail

Summary

• ID
  rs37295283
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:29354910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATCTTTAA CTTTTTTCTT
  TTTGATGACC AAAATTGAAT CAGGAGGCCA ACATCTTGGC CTGTGGGGTT GGTACCAACA
  AGGACCTGGC CCTAAGTTGT TGATTTACCT ACACATACTT TAGCTTTGGG ACAGAGATCT
  AAGACATGAG TGAGAATTTG TCTCCATGGA TGCTGCAGGG AACTGAACAG GAATGATTTT
  Y
  TTCCTGAACA ACAAGGCTGT ACACTAATTC CTGAAGGTGA GCAGGTTTAG GAGGTATAAT
  CTGAAGAACA TAGATCATAA CCTAAAAGCT GTGGGTGACT CTACGTACCC CTTGGAATTG
  GCAGGAATTT TTCTACAAGC AACGTGGACT ATGCGTCTGC TTTTGGTACC TGGTACTGGC
  CTTCTGTATT TGGAGCCATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52001393	NES15018808	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37295283					SNP	T	T	T	T	T	T	T	T	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52001393	NES15018808	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:29354910 () rs orientation: forward

Symbol	Name	Function Class
Gm68891	predicted gene, 68891	1469 bp downstream
Ntm	neurotrimin	within coordinates
Tssr84200	transcription start site region 84200	1225 bp downstream
Tssr84201	transcription start site region 84201	1211 bp downstream