rs37297959 SNP Detail

Summary

• ID
  rs37297959
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:27297222 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTC CATTAGTACA TATTGCCTAG
  M
  AAGTCAGTAT GGTTTTTGAT TGGAT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50718293	NES13574426	PERLEGEN	MM_PANEL2	f	SNP	A		C	C	A	A	A	C	A	C	A		C	A	A	C		A
ss146307180	ENSMUSSNP4256590	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C						A
ss325786789	CHEV_19_27394312	CHEVERUD	SCREENING_POP	f	SNP												C					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37297959					SNP	A	A	C	C	A	A	A	C	A	C	A	C	C	A	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50718293	NES13574426	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:27297222 () rs orientation: forward

Symbol	Name	Function Class
Gm35268	predicted gene, 35268	within coordinates
Gm50114	predicted gene, 50114	within coordinates
Tssr155737	transcription start site region 155737	1937 bp upstream