rs37298673 SNP Detail

Summary

• ID
  rs37298673
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:74605747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTAGCAT TCCAGACCCA
  ATCCCAGAAG CCCCAGGAAG CCTAGCTTGT CTCCAATCAA TTCAGACACA CAGGGAAGTC
  ATCCCTCCCC CAACCCCACA CAGACAGTGA CCTGGTAGGG CCTCTGCCTC TGGTTCAGTC
  AACCTCTCCA AGAACTGTAT GGAACAGCCT GGCTTGAGCC CTCATCACTG AGCACATAAC
  R
  GGCTGACAGT CAACATCATG TCGCCACTTG TTTGTCTCAC CCTGTCTCTG GATATTTCTG
  GATGTCCTTT CCCCAATTAC ATGTCCATCA TATCCAGAGT CCCAGGCCAT CTGCCCCAGC
  ATCCGAGATC TCCCCTCTTC TCCTGCTGAA AGGCTTGCAC TAGCAAACAC ACCAGTATCC
  TGAGGCTCTC CGCTGGCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51714849	NES14563481	PERLEGEN	MM_PANEL2	f	SNP	A			G		A	G	A	G
ss148149803	ENSMUSSNP3977465	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37298673					SNP	A	A	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51714849	NES14563481	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:74605747 () rs orientation: forward

Symbol	Name	Function Class
Gm33124	predicted gene, 33124	983 bp upstream
Lypd2	Ly6/Plaur domain containing 2	Intron
Tssr134735	transcription start site region 134735	394 bp downstream
Tssr134736	transcription start site region 134736	416 bp downstream
Tssr134737	transcription start site region 134737	460 bp downstream
Tssr134738	transcription start site region 134738	862 bp downstream