rs37298778 SNP Detail

Summary

• ID
  rs37298778
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88532020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGCAAGGC TGTCAGGCAG
  GTTTCCAGCA GAGCTGGGCC AAAGGACCAG AATCAGGAAC GCTGTCTGGG AGCTACCCAC
  CATCACGGTA TGGTATCTAG GCACATCCTC ATCACACATC AGAGGGAAAG AGTGCTTCCC
  CTGCCACTAG AGGAATGAGA CTGTGTGCTG CGTGCGTGCG ACTGTGGCCA TCAGTTCGTA
  M
  TCAGTGGGAC CCCAGGTCCT GACAAATTGA GCTGGGCACG TGGCAGGGTT CTATAAACAT
  GGATGCCAGT CACCTGGTTC ATCCATTCAC CCACACATCC AGTCTCTGAA AGGAGGTTCA
  TGGCCTGAAG CTGATAACTG CCAAGTACCT TGGTGTTGGA GACAGGAGGG TGAACCCCAA
  AGGTTGTGGG GTCCCCACAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50598715	NES14052532	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	C	C	C	C		A	C	C	A		C
ss145451999	ENSMUSSNP5756381	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A				C
ss322761685	CHEV_8_90329291	CHEVERUD	SCREENING_POP	f	SNP									A					C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37298778					SNP	A	A	A	A	C	C	C	C	A	A	C	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50598715	NES14052532	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88532020 () rs orientation: forward

Symbol	Name	Function Class
Tssr82324	transcription start site region 82324	990 bp upstream
Tssr82325	transcription start site region 82325	929 bp upstream
Zfp423	zinc finger protein 423	within coordinates