rs37299512 SNP Detail

Summary

• ID
  rs37299512
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:123828574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGGT AGGAATTCAG TATTGTATTT
  S
  GTCACACCTG ATTTCCCCCC GAGGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss50631647	NES14029318	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	C	C	C		C	C		G
ss322854279	CHEV_8_125625735	CHEVERUD	SCREENING_POP	f	SNP											C			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs37299512					SNP	G	G	G	G	G	G	G	C	C	C	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50631647	NES14029318	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:123828574 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21239	CpG island 21239	299 bp proximal
Rpl13	ribosomal protein L13	515 bp upstream
Rr382749	regulatory region 382749	820 bp downstream
Rr672353	regulatory region 672353	1139 bp distal
Rr672354	regulatory region 672354	373 bp distal
Rr672355	regulatory region 672355	25 bp proximal
Snord68	small nucleolar RNA, C/D box 68	1223 bp upstream
Tssr79911	transcription start site region 79911	509 bp upstream
Tssr79912	transcription start site region 79912	524 bp upstream
Tssr79913	transcription start site region 79913	596 bp upstream
Tssr83335	transcription start site region 83335	425 bp downstream