rs37300678 SNP Detail

Summary

• ID
  rs37300678
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34923485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAAGAAAGT AGTAGCCAGT GCTCTTAACC ACCAAACTAC
  CTCTCCAACC CTCATGGGAA CATTTTTTTG AACAGCATTC TTTACATTAT ATTTGTAATC
  R
  TGAGCACGGT ATGTTCAAAA GATGTCAAGG TTTTGCTCAT GAAAAGAAAA GATGAAGATG
  GAGGAGGGGG GAAGAAGGAA AAAATTACAA TTTTTGCAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss50525749	NES14089019	PERLEGEN	MM_PANEL2	f	SNP		G	A	A	A	A		A	G	A	A
ss149109321	ENSMUSSNP6447549	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss322578198	CHEV_8_35519385	CHEVERUD	SCREENING_POP	f	SNP							G					A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs37300678					SNP	G	G	A	A	A	A	G	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50525749	NES14089019	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34923485 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20247	CpG island 20247	629 bp distal
Gm39159	predicted gene, 39159	495 bp downstream
Gm45349	predicted gene 45349	within coordinates
Gm46038	predicted gene, 46038	587 bp upstream
Rr400818	regulatory region 400818	702 bp downstream