rs37300696 SNP Detail

Summary

• ID
  rs37300696
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63795042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGTGCAA TCTCAGGATA
  GGCACTTCCG GCCTCTGGGC CATCCTGGGG CAATCACACA GTGCTCTCTG CTTAAAGGGC
  TTAGGGACCC ATACGCTACC CTCATAATAG TCACCATGAC ATTGGTCATG AATTGTCCTG
  GGAGGATACG TAGGTCCTGC AGGGGCATCC AGATGATGCC TACCAGAGGA GACACTGACT
  R
  TGAAAGATGA GTAGCTGCCA GGCTCTGGGT TAGGGTAAGA AGATGGAGAC TTACCTATGG
  GGACACCAAA CTCTCAAGCC ACAGGATTTT AATACAGTAT TTCTCGTGTC CGTGTACATG
  TGCGTGTACG TGTGTGTGTG TGTACATGTG TGGGTGCATG TGTGTGTGCA GGTATGAATG
  CATGCGCATG TCAGTGTATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50722631	NES14252374	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37300696					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50722631	NES14252374	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63795042 () rs orientation: forward

Symbol	Name	Function Class
D9Mit175	DNA segment, Chr 9, Massachusetts Institute of Technology 175	1335 bp distal
Rr49	regulatory region 49	within coordinates
Rr959	regulatory region 959	within coordinates
Rr2247	regulatory region 2247	1142 bp distal