rs37309011 SNP Detail

Summary

• ID
  rs37309011
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94725617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGACTCTA GGAAACCAGC
  TGATCCAGCT GTGGGTATCA GCGCCATCTC CTTGGGCTCC AAGGGAAGTG ATCTGAGGGA
  TGAGGAAGAG CCTTGTTCGT CCTGACAAGT GAGTCACAGC GCTTAACCTG GTTTCCTGTT
  GGTGCCAAAG GCTGGAAGGC TCCGGGTCAA CTTTGTGAGT CACTGGCTTA GGATTTTCTG
  K
  CATTCGTTTT TGGAATATTC TCAGTGTACA TTCTCTTAAC TCTCTACTTC CTTCCTTTCT
  TCTTCCCTCT TTTCCTCCTC CCCTCCTTCC CTCCCTTCCC AGCTTTTTCT CTTCCTTCCT
  TTGCTCTTCT TACTTGAAAT ACCTCTGACC TGACTTACTT GAAATATCCT CTGCCAGGGG
  ATACTTTTGC ACTGGTAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51764233	NES14792223	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37309011					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51764233	NES14792223	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94725617 () rs orientation: forward

Symbol	Name	Function Class
Rr379778	regulatory region 379778	986 bp upstream
Rr634937	regulatory region 634937	1722 bp proximal