rs37312233 SNP Detail

Summary

• ID
  rs37312233
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:109685787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCATCCTGC CATGTCTACG GGCTGTGCTC TTTGATGCCA
  TTAGCAAGGC CTTGAGGACT GGTGGGTGCT GGCTACGATT GGGACCAGGG AACAGCAAGC
  W
  GTCATCAGCC ACTGCTGCCT GTCTCTTATC TCTGATACTG GTACCCCTGC CCTCTGGAGT
  GGTAGATGTA AGGCGGCACT TCAGACCCCT TTTCCCTAGT                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss51052963	NES14374723	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs37312233					SNP	A	A	A	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51052963	NES14374723	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:109685787 () rs orientation: forward

Symbol	Name	Function Class
Gm59461	predicted gene, 59461	282 bp downstream
Gm60279	predicted gene, 60279	736 bp downstream
Mir495	microRNA 495	537 bp downstream
Mir667	microRNA 667	653 bp upstream
Mirc6	microRNA cluster 6, including Mir379 through Mir544	within coordinates
Mirc36	microRNA cluster 36, including Mir379 through Mir3072	within coordinates
Tssr115176	transcription start site region 115176	531 bp downstream