rs37317812 SNP Detail

Summary

• ID
  rs37317812
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:26412619 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGATAAAT TGTATTGAGG
  CTTGGTTACA GTAGTTACAG AAAGTCATTA TGGGGACACT TGAAGACTCC ATTCTTCATT
  GACAATGAAT ATTTATATAA ATCTATATAT TCTCCAATAG ATTCAATTTT CTAGTCATGC
  CTTTTCCTGC AATTTGGAAA TCTTGATTTC CTGGACTCCT TCCAAGGTAA GGCAGTTAAA
  Y
  AGCAACAACA GCAACAAAAA TCACCTTGCC CTCGATTCAC TTGAGTGAAA AGCAGTGTAA
  CTGTTTATCT TAAGTCTCTC TTAGTTCAGC AACTGCCTCT TCTAGCAACC TTCACCCAGC
  CCTTTTGGTA GGCAAGACAG TTTCCATGGT GACTATGTTG TTTCTACTGG ATTGCAGTAG
  CCCTGCAGAG GAAAAACTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51506131	NES14640641	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37317812					SNP	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51506131	NES14640641	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:26412619 () rs orientation: forward

Symbol	Name	Function Class
Dnah12	dynein, axonemal, heavy chain 12	1810 bp upstream
Gm62888	predicted gene, 62888	within coordinates
Rr489385	regulatory region 489385	404 bp distal
Tssr124706	transcription start site region 124706	147 bp upstream
Tssr124707	transcription start site region 124707	197 bp upstream
Tssr124708	transcription start site region 124708	1790 bp upstream
Tssr124709	transcription start site region 124709	1803 bp upstream
Tssr124710	transcription start site region 124710	1821 bp upstream