rs37319206 SNP Detail

Summary

• ID
  rs37319206
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40289408 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCCTCCAG GCTAATGTCC
  TCTATATAGA TGTAAATCTT CTCATTGGTC CTATTTTTCC AATCATGGGG ACACTACAAT
  ACCAGACCAG AGGACCCCAA ACATACTCTC TAGAAACACA TCTCTGGAAA AGTTAAAGTT
  CTTTGGTCTT TGGCCATCGG CTACTTCGGG AAAATCCATA GAAACCCTCT TTTACAGCTA
  W
  GTACAAGAGT CCGTGGAGGG CCTGTGGTGG CAGCTGGAGA GCTAGGTGTG GTAGGTGCAC
  ACTTGTGACT GTGTATGCAC ACACTGAGGT ATTTGCCAGG GTTGTGTCTC AGACAGTACA
  ACTGAGCAAT AACAAGGGTA GGATCTTGGT ATCCCTGATG CCAAGCAGCC AGGAAGATGC
  AACTTTAGGA TATAAATATA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50677876	NES13999659	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37319206					SNP	A	A	A	A	A	A	A	A	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50677876	NES13999659	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40289408 () rs orientation: forward

Symbol	Name	Function Class
Gramd1b	GRAM domain containing 1B	within coordinates
Rr676805	regulatory region 676805	1702 bp distal
Rr676806	regulatory region 676806	1834 bp distal
Rr676807	regulatory region 676807	1783 bp distal
Rr676808	regulatory region 676808	1276 bp distal
Tssr88904	transcription start site region 88904	1973 bp upstream
Tssr88905	transcription start site region 88905	1849 bp upstream
Tssr88906	transcription start site region 88906	1754 bp upstream
Tssr88907	transcription start site region 88907	1697 bp upstream
Tssr88908	transcription start site region 88908	1668 bp upstream
Tssr88909	transcription start site region 88909	1265 bp upstream