rs37325429 SNP Detail

Summary

• ID
  rs37325429
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:92032715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGCC ATAGGACAAC ATTTTCCCCT
  R
  AGCGGAGTCT TCTGTAAATG CGGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50605901	NES14042924	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	A	G		A	A		A
ss145568296	ENSMUSSNP4055960	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			A
ss322790923	CHEV_8_93829986	CHEVERUD	SCREENING_POP	f	SNP							A			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37325429					SNP	A	G	G	G	A	G	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50605901	NES14042924	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:92032715 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm45428	predicted gene 45428			within coordinates
Rpgrip1l	Rpgrip1-like			Intron
				Noncoding-Transcript-Variant
Rr382458	regulatory region 382458			740 bp downstream
Rr406224	regulatory region 406224			within coordinates
Rr407238	regulatory region 407238			712 bp distal
Rr667510	regulatory region 667510			1125 bp distal