rs37325853 SNP Detail

Summary

• ID
  rs37325853
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:71057911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTGTGAGT TCGATGCCAA
  CACCTGGTCT AGAGAAACCC GTCCTAACAA AACAAACAAA TACAAAGATG GAGAAAGTCA
  CACAGTCAAT TTCTAAAAAC AGACTACAAG AAAGACAGGT AACAAAGTTA ATAGTTCTCC
  ACAACTGGCA AAAATGGCAA GTCTTTACAA TGAAGATGAA GAATGAATAG ATATTCAGTC
  K
  TGTAATAGAA AATCTTAGAA TTCATTTTTT TTTTAGTTCT AGTATTATCT ACCGAAGAAA
  TACAGATTTT AAAGGACCTA AAGGCTGATA ATATATCTGA AACAGAAACA AGAGAAACTT
  GGAAGATGCC TGCCTATTAT AAATTCACTA GTTGATCACT TAGCAAGGAG CATGTTCACA
  GAGGTGGAAG GCACGTTTCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50734978	NES14244209	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37325853					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50734978	NES14244209	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:71057911 () rs orientation: forward

Symbol	Name	Function Class
Aqp9	aquaporin 9	within coordinates
Gm32714	predicted gene, 32714	203 bp upstream
Rr682494	regulatory region 682494	148 bp distal