rs37330291 SNP Detail

Summary

• ID
  rs37330291
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86405764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGAAATG AGCCTGGTCT
  TCTAGAGCAA CAAATGCCCC TAGCCCCTGA ACCAGTTCTT GCAGCCCCTG AATATACATT
  GTTCACCCAT GGAGAAAGAC TCTCCCTCCA TGTCTGTGAG TTGTGGCAGT CCAGAGATGC
  CCCTTTCTCT CTGGGTGTCT GCTCTTCTGG AATGAAGGCT GCTCTAGGAG CTTTCCTCTC
  Y
  GCTCCCCTGT GCCGTGTAGT CTATTGCATA AGCTCAGTCT GTGTGCAATG TTATGTCTGT
  CTGCCCACTG ACCAGGTTCC AGTTTATGAA AGGCATTTGA GCAGCAAGAT TGAGTCCTCA
  TTCTCAAAGT AACCAGTGTC TCACAGGTAA CATTTGTCAG AACTGATCAC GTGATGATAT
  AGAACTCTAG CTTTTCCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51753397	NES14806954	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37330291					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51753397	NES14806954	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86405764 () rs orientation: forward

Symbol	Name	Function Class
Gm44790	predicted gene 44790	within coordinates
Tia1	cytotoxic granule-associated RNA binding protein 1	within coordinates