rs37334813 SNP Detail

Summary

• ID
  rs37334813
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61006084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGAGAGAG AGAGAGAGAG AGAGAGGAGA AGAGAAGAAG
  GAGGAGGAGG AGGAGAAGAA GGAGAAGGAG AAGAGAAGAT AGAAAAGCAG AGAATTTCAT
  M
  TGCCAGAATT TTGCACTACT GGCCTAGGAA GAGGCATTTT AAAAAAAAAA AAACAGGATA
  AATCACAAAA ATAACAGACC TTTCTAGAAA AGCTTATAGA                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51523304	NES14633426	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37334813					SNP	C	C	C	C	C	C	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51523304	NES14633426	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61006084 () rs orientation: forward

Symbol	Name	Function Class
C1qtnf9	C1q and tumor necrosis factor related protein 9	within coordinates
Gm34997	predicted gene, 34997	592 bp upstream
Rr289661	regulatory region 289661	717 bp proximal
Tssr125961	transcription start site region 125961	541 bp downstream
Tssr125962	transcription start site region 125962	517 bp downstream
Tssr125963	transcription start site region 125963	498 bp downstream