rs37339672 SNP Detail

Summary

• ID
  rs37339672
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40272678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAAAGGAT GATGGAGAGT
  AGACTGTGAG CAGCTGATGG ATGGTAACAC TTTGCAGGGG GGGGGGGGAG TTCATACCAA
  GCAGATAGCC TGTGCTGGAG AAAAACGCAC GGCTGCCATA GCCTCTTCTC CTCACATAAC
  TGAAGACCGT CACTTGTCCA TATAGACTGC ATGGTTCAGA TTCATGATGC AGTATCAGCT
  S
  AGTTTCATGA TGGTAGGCGG AATTTTATAT CAAAACAGAA TGAAGGTGGG TGTGAAGGCA
  CATGTGTATA ATTCTTATAC TTGGGAGATG AAGGCAGGAA AATCAGGAGA TCAAGGTCAT
  TGAGGCCACT CAGCAAATAT GTCCCTTCCT GTGCAAAAGA TCAGTGTGCT GTTTTTAACT
  GCATGTATAT ACCTATGTAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50677926	NES13999884	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C		G	C	C	G		C
ss322915564	CHEV_9_40168967	CHEVERUD	SCREENING_POP	f	SNP											G					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37339672					SNP	C	C	C	C	C	C	G	C	C	C	G	G	C	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50677926	NES13999884	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40272678 () rs orientation: forward

Symbol	Name	Function Class
Gm48114	predicted gene, 48114	1835 bp downstream
Gm68184	predicted gene, 68184	within coordinates
Gramd1b	GRAM domain containing 1B	within coordinates