rs37346116 SNP Detail

Summary

• ID
  rs37346116
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88531984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAGTGGA AATACTAAAG
  GTGTAGTTTT CTTCCCTCTG CAAGGCTGTC AGGCAGGTTT CCAGCAGAGC TGGGCCAAAG
  GACCAGAATC AGGAACGCTG TCTGGGAGCT ACCCACCATC ACGGTATGGT ATCTAGGCAC
  ATCCTCATCA CACATCAGAG GGAAAGAGTG CTTCCCCTGC CACTAGAGGA ATGAGACTGT
  R
  TGCTGCGTGC GTGCGACTGT GGCCATCAGT TCGTACTCAG TGGGACCCCA GGTCCTGACA
  AATTGAGCTG GGCACGTGGC AGGGTTCTAT AAACATGGAT GCCAGTCACC TGGTTCATCC
  ATTCACCCAC ACATCCAGTC TCTGAAAGGA GGTTCATGGC CTGAAGCTGA TAACTGCCAA
  GTACCTTGGT GTTGGAGACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50598719	NES14052528	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	G	G	G	G		A	G	G	A		G
ss145451988	ENSMUSSNP4855827	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A				G
ss322761683	CHEV_8_90329255	CHEVERUD	SCREENING_POP	f	SNP									A					G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37346116					SNP	A	A	A	A	G	G	G	G	A	A	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50598719	NES14052528	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88531984 () rs orientation: forward

Symbol	Name	Function Class
Tssr82324	transcription start site region 82324	954 bp upstream
Tssr82325	transcription start site region 82325	893 bp upstream
Zfp423	zinc finger protein 423	within coordinates