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rs37346427 SNP Detail
Summary
  • ID
    rs37346427
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr9:119183791 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AAAATTCCTT AAAGAAATAG
    ACTGAATATA GATTTAATTT CCAGTATACC GCCAAGATGA ATCTTCTGCA TATAAACATA
    TTATAAAATT ACAGATACAT AAAACAAATT ATTGAGTCTG AATTATAATT GCCTTATCTA
    GTTCAGTCCC TAATTTCTGG TGGTTTCTTT GTTTTGCTTT TTGTGTCACA ATACTGGGAT
    Y
    TATAGCCTTG TCCCTGCTAG GCAAGTGCTC TATGGCTGAG CTGCTCTCCC AGCCTGCATT
    TTATATTCAG ATGGACCACT AAACTGCTCA GGCTGGGCTT GAACTCACTA CAGATGTGGG
    TACTGGGAAT CAAACCCAGC TCTCCTGCAA GACCAGTATG TGCTCGTAGC CACAGGGCCA
    TCTCTCGAGC CCCTCTTCTG                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
SM/J
WSB/EiJ
ss50800725 NES14205170 PERLEGEN MM_PANEL2 f SNP T T T T T T T T T C T T T
ss323218995 CHEV_9_119263843 CHEVERUD SCREENING_POP f SNP C T
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
SM/J
WSB/EiJ
rs37346427 SNP T T T T T T T T T C C T T T T
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss50800725 NES14205170 PERLEGEN MM_PANEL f SNP C/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory