TAAAG GTGTGCAGAC ATTTTCGATG R CTTGGCTTCC AGCTGTTGGC ATCTC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
CAST/EiJ |
DBA/2J |
KK/HlJ |
LG/J |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss50904628 | NES14161094 | PERLEGEN | MM_PANEL2 | f | SNP | G | A | G | A | G | A | ||||
ss147372088 | ENSMUSSNP6482901 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||||||||
ss323405845 | CHEV_10_93360344 | CHEVERUD | SCREENING_POP | f | SNP | G | G | ||||||||
SNP Consensus Information | |||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
CAST/EiJ |
DBA/2J |
KK/HlJ |
LG/J |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
||||
rs37351320 | SNP | G | G | A | G | G | G | A | G | A | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss50904628 | NES14161094 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr10:93733461 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4930471D02Rik | RIKEN cDNA 4930471D02 gene | within coordinates | ||||||
Metap2 | methionine aminopeptidase 2 | 509 bp upstream | ||||||
Rr437346 | regulatory region 437346 | 688 bp distal | ||||||
Rr437347 | regulatory region 437347 | 154 bp distal | ||||||
Rr437348 | regulatory region 437348 | 1734 bp proximal | ||||||
Tssr95291 | transcription start site region 95291 | 438 bp downstream | ||||||
Tssr95292 | transcription start site region 95292 | 424 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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