rs37354933 SNP Detail

Summary

• ID
  rs37354933
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:29352199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCATTTGT AGATAACAAT
  TTCTATCTGT AGCTACCCTG TGGCCACTAT TTCGTTTACA AAGAGACAGT TACTTGTGGG
  CTGGAGGCCC CTTCCATTCT GTCATCAAGA TGAGGATAGT AGGTCATTTC ATGCACAGAA
  AAGACATACT GCTTTGCTTT GCTGGTGAGG CGACCTTGAG AATATCCTAA CCAAGAACCT
  R
  TGATAAGAGC TGGAGACATA GGCCCCTTTG GGACAGTAGC TTGTCATTTT CTCCTTAACA
  CCTTCTGCTT TAATATTTCA GACACTGAAC TTCAGCCAAA GACACCGAGT ACCTGACTGG
  AACTCAAAAA ACCGAGTCCT GTTTTCTGAA TTCTGCCACA GGTTGGTTGT ACAGCAATTA
  ACATCAGTGC CATGAAGTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52001396	NES15018906	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G	G	G	G	A		G	G	G	G
ss136239118	ENSMUSSNP6891538	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G									A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37354933					SNP	G	G	G	G	G	G	G	G	G	G	A	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52001396	NES15018906	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:29352199 () rs orientation: forward

Symbol	Name	Function Class
Gm68891	predicted gene, 68891	within coordinates
Ntm	neurotrimin	within coordinates
Tssr84200	transcription start site region 84200	1469 bp upstream
Tssr84201	transcription start site region 84201	1494 bp upstream